Construct: shRNA TRCN0000195237

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002733.3-329s1c1
DNA Barcode:
CCATCACTGATTTCATCAATA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PRKAG1 (5571)
Gene Description:
protein kinase AMP-activated non-catalytic subunit gamma 1
Transcript:
RefSeq NM_002733.3 (NON-CURRENT)
Match location:
Position 329 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000195237)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATCACTGATTTCATCAATA
Hairpin Sequence:
5'-CCGG-CCATCACTGATTTCATCAATA-CTCGAG-TATTGATGAAATCAGTGATGG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATCACTGATTTCATCAATACTCGAGTATTGATGAAATCAGTGATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATCACTGATTTCATCAATACTCGAGTATTGATGAAATCAGTGATGG-3'

Other clones with same target sequence:

(none)