Construct: shRNA TRCN0000196269

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005108.2-2573s1c1
DNA Barcode:
GCTGAAGAAGTTGTGTCATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
XYLB (9942)
Gene Description:
xylulokinase
Transcript:
RefSeq NM_005108.2 (NON-CURRENT)
Match location:
Position 2573 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000196269)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGAAGAAGTTGTGTCATTT
Hairpin Sequence:
5'-CCGG-GCTGAAGAAGTTGTGTCATTT-CTCGAG-AAATGACACAACTTCTTCAGC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGAAGAAGTTGTGTCATTTCTCGAGAAATGACACAACTTCTTCAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGAAGAAGTTGTGTCATTTCTCGAGAAATGACACAACTTCTTCAGC-3'

Other clones with same target sequence:

(none)