Construct: shRNA TRCN0000196831
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_006251.5-4192s1c1
- DNA Barcode:
- GCACAGACAATTGCAGTAAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PRKAA1 (5562)
- Gene Description:
- protein kinase AMP-activated catalytic subunit alpha 1
- Transcript:
- RefSeq NM_006251.5 (CURRENT)
- Match location:
- Position 4192 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000196831)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCACAGACAATTGCAGTAAAT
- Hairpin Sequence:
-
5'-CCGG-GCACAGACAATTGCAGTAAAT-CTCGAG-ATTTACTGCAATTGTCTGTGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCACAGACAATTGCAGTAAATCTCGAGATTTACTGCAATTGTCTGTGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCACAGACAATTGCAGTAAATCTCGAGATTTACTGCAATTGTCTGTGC-3'
Other clones with same target sequence:
(none)
