Construct: shRNA TRCN0000197152
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_006904.6-12761s1c1
- DNA Barcode:
- GAAACAGCTGTCTCCGTAAAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PRKDC (5591)
- Gene Description:
- protein kinase, DNA-activated, catalytic subunit
- Transcript:
- RefSeq NM_006904.6 (NON-CURRENT)
- Match location:
- Position 12761 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000197152)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GAAACAGCTGTCTCCGTAAAT
- Hairpin Sequence:
-
5'-CCGG-GAAACAGCTGTCTCCGTAAAT-CTCGAG-ATTTACGGAGACAGCTGTTTC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGAAACAGCTGTCTCCGTAAATCTCGAGATTTACGGAGACAGCTGTTTCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGAAACAGCTGTCTCCGTAAATCTCGAGATTTACGGAGACAGCTGTTTC-3'
Other clones with same target sequence:
(none)
