Construct: shRNA TRCN0000198580
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_177895.2-919s1c1
- DNA Barcode:
- GCCTGGCTTATTTGTGCATAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- A530021J07Rik (330578)
- Gene Description:
- Riken cDNA A530021J07 gene
- Transcript:
- RefSeq NM_177895.2 (NON-CURRENT)
- Match location:
- Position 919 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000198580)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTGGCTTATTTGTGCATAT
- Hairpin Sequence:
-
5'-CCGG-GCCTGGCTTATTTGTGCATAT-CTCGAG-ATATGCACAAATAAGCCAGGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTGGCTTATTTGTGCATATCTCGAGATATGCACAAATAAGCCAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTGGCTTATTTGTGCATATCTCGAGATATGCACAAATAAGCCAGGC-3'
Other clones with same target sequence:
(none)
