Construct: shRNA TRCN0000200149

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_027123.2-1782s1c1
DNA Barcode:
CAAAGGTGTTGACGCCCTATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Fastkd3 (69577)
Gene Description:
FAST kinase domains 3
Transcript:
RefSeq NM_027123.2 (NON-CURRENT)
Match location:
Position 1782 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000200149)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAAGGTGTTGACGCCCTATT
Hairpin Sequence:
5'-CCGG-CAAAGGTGTTGACGCCCTATT-CTCGAG-AATAGGGCGTCAACACCTTTG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAAGGTGTTGACGCCCTATTCTCGAGAATAGGGCGTCAACACCTTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAAGGTGTTGACGCCCTATTCTCGAGAATAGGGCGTCAACACCTTTG-3'

Other clones with same target sequence:

(none)