Construct: shRNA TRCN0000200348

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001004061.1-1184s1c1
DNA Barcode:
GTCCAGGCTGTGTGTTTGATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Fam170a (225497)
Gene Description:
family with sequence similarity 170, member A
Transcript:
RefSeq NM_001004061.1 (CURRENT)
Match location:
Position 1184 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000200348)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTCCAGGCTGTGTGTTTGATT
Hairpin Sequence:
5'-CCGG-GTCCAGGCTGTGTGTTTGATT-CTCGAG-AATCAAACACACAGCCTGGAC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTCCAGGCTGTGTGTTTGATTCTCGAGAATCAAACACACAGCCTGGACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTCCAGGCTGTGTGTTTGATTCTCGAGAATCAAACACACAGCCTGGAC-3'

Other clones with same target sequence:

(none)