Construct: shRNA TRCN0000200430
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_013534.3-1795s1c1
- DNA Barcode:
- GCCTACACCTATCGAGACTAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- P3h3 (14789)
- Gene Description:
- prolyl 3-hydroxylase 3
- Transcript:
- RefSeq NM_013534.3 (NON-CURRENT)
- Match location:
- Position 1795 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000200430)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTACACCTATCGAGACTAT
- Hairpin Sequence:
-
5'-CCGG-GCCTACACCTATCGAGACTAT-CTCGAG-ATAGTCTCGATAGGTGTAGGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTACACCTATCGAGACTATCTCGAGATAGTCTCGATAGGTGTAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTACACCTATCGAGACTATCTCGAGATAGTCTCGATAGGTGTAGGC-3'
Other clones with same target sequence:
(none)
