Construct: shRNA TRCN0000200867

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008917.1-718s1c1
DNA Barcode:
GTTTGTGATGGTGAAATTCTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ppt1 (19063)
Gene Description:
palmitoyl-protein thioesterase 1
Transcript:
RefSeq NM_008917.1 (NON-CURRENT)
Match location:
Position 718 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000200867)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTTTGTGATGGTGAAATTCTT
Hairpin Sequence:
5'-CCGG-GTTTGTGATGGTGAAATTCTT-CTCGAG-AAGAATTTCACCATCACAAAC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTTTGTGATGGTGAAATTCTTCTCGAGAAGAATTTCACCATCACAAACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTTTGTGATGGTGAAATTCTTCTCGAGAAGAATTTCACCATCACAAAC-3'

Other clones with same target sequence:

  1. TRCN0000292658