Construct: shRNA TRCN0000201507
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_019424.1-1998s1c1
- DNA Barcode:
- CCTGTGGTTCGAGAATGACAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Hps1 (192236)
- Gene Description:
- HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
- Transcript:
- RefSeq NM_019424.1 (NON-CURRENT)
- Match location:
- Position 1998 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000201507)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGTGGTTCGAGAATGACAT
- Hairpin Sequence:
-
5'-CCGG-CCTGTGGTTCGAGAATGACAT-CTCGAG-ATGTCATTCTCGAACCACAGG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGTGGTTCGAGAATGACATCTCGAGATGTCATTCTCGAACCACAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGTGGTTCGAGAATGACATCTCGAGATGTCATTCTCGAACCACAGG-3'
Other clones with same target sequence:
-
TRCN0000082870
