Construct: shRNA TRCN0000203229
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_285515.2-3547s1c1
- DNA Barcode:
- GCTTCATTTAAGTATGCAGAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Gm5133 (333563)
- Gene Description:
- predicted pseudogene 5133; fibronectin type III domain containing 3C2 pseudogene
- Transcript:
- RefSeq XM_285515.2 (NON-CURRENT)
- Match location:
- Position 3547 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000203229)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTTCATTTAAGTATGCAGAA
- Hairpin Sequence:
-
5'-CCGG-GCTTCATTTAAGTATGCAGAA-CTCGAG-TTCTGCATACTTAAATGAAGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTTCATTTAAGTATGCAGAACTCGAGTTCTGCATACTTAAATGAAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTTCATTTAAGTATGCAGAACTCGAGTTCTGCATACTTAAATGAAGC-3'
Other clones with same target sequence:
-
TRCN0000101932
