Construct: shRNA TRCN0000215399

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_134136.3-3350s1c1
DNA Barcode:
CATCAATCAAGAGCTCATTAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Fbxo38 (107035)
Gene Description:
F-box protein 38
Transcript:
RefSeq NM_134136.3 (CURRENT)
Match location:
Position 3350 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000215399)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATCAATCAAGAGCTCATTAA
Hairpin Sequence:
5'-CCGG-CATCAATCAAGAGCTCATTAA-CTCGAG-TTAATGAGCTCTTGATTGATG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATCAATCAAGAGCTCATTAACTCGAGTTAATGAGCTCTTGATTGATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATCAATCAAGAGCTCATTAACTCGAGTTAATGAGCTCTTGATTGATG-3'

Other clones with same target sequence:

  1. TRCN0000249721