Construct: shRNA TRCN0000216551
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_026470.3-2280s1c1
- DNA Barcode:
- GTCATTCATGTAGCTAATATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Spata6 (67946)
- Gene Description:
- spermatogenesis associated 6
- Transcript:
- RefSeq NM_026470.3 (CURRENT)
- Match location:
- Position 2280 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000216551)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GTCATTCATGTAGCTAATATT
- Hairpin Sequence:
-
5'-CCGG-GTCATTCATGTAGCTAATATT-CTCGAG-AATATTAGCTACATGAATGAC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGTCATTCATGTAGCTAATATTCTCGAGAATATTAGCTACATGAATGACTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGTCATTCATGTAGCTAATATTCTCGAGAATATTAGCTACATGAATGAC-3'
Other clones with same target sequence:
-
TRCN0000248455
