Construct: shRNA TRCN0000216755

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_028137.2-940s1c1
DNA Barcode:
GATGGCTCCCTTGTAGTTAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Msantd3 (66665)
Gene Description:
Myb/SANT-like DNA-binding domain containing 3
Transcript:
RefSeq NM_028137.2 (NON-CURRENT)
Match location:
Position 940 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000216755)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GATGGCTCCCTTGTAGTTAAT
Hairpin Sequence:
5'-CCGG-GATGGCTCCCTTGTAGTTAAT-CTCGAG-ATTAACTACAAGGGAGCCATC-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGATGGCTCCCTTGTAGTTAATCTCGAGATTAACTACAAGGGAGCCATCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGATGGCTCCCTTGTAGTTAATCTCGAGATTAACTACAAGGGAGCCATC-3'

Other clones with same target sequence:

(none)