Construct: shRNA TRCN0000217541

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_027724.1-298s1c1
DNA Barcode:
CACTGGATAGAAGCGTTTAAC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cage1 (71213)
Gene Description:
cancer antigen 1
Transcript:
RefSeq NM_027724.1 (NON-CURRENT)
Match location:
Position 298 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000217541)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CACTGGATAGAAGCGTTTAAC
Hairpin Sequence:
5'-CCGG-CACTGGATAGAAGCGTTTAAC-CTCGAG-GTTAAACGCTTCTATCCAGTG-TTTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCACTGGATAGAAGCGTTTAACCTCGAGGTTAAACGCTTCTATCCAGTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACACTGGATAGAAGCGTTTAACCTCGAGGTTAAACGCTTCTATCCAGTG-3'

Other clones with same target sequence:

  1. TRCN0000252281