Construct: shRNA TRCN0000218229
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_139149.2-939s21c1
- DNA Barcode:
- CTAGGCGAGAATGTTACAATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Fus (233908)
- Gene Description:
- fused in sarcoma
- Transcript:
- RefSeq NM_139149.2 (CURRENT)
- Match location:
- Position 939 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000218229)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTAGGCGAGAATGTTACAATT
- Hairpin Sequence:
-
5'-CCGG-CTAGGCGAGAATGTTACAATT-CTCGAG-AATTGTAACATTCTCGCCTAG-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTAGGCGAGAATGTTACAATTCTCGAGAATTGTAACATTCTCGCCTAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTAGGCGAGAATGTTACAATTCTCGAGAATTGTAACATTCTCGCCTAG-3'
Other clones with same target sequence:
(none)
