Construct: shRNA TRCN0000220108
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_005704.x-5598s1c2, TRCN0000001847, NM_005704.x-5598s1c1
- DNA Barcode:
- ACGTGCTCTCTGAATGCCAAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- PTPRU (10076)
- Gene Description:
- protein tyrosine phosphatase receptor type U
- Transcript:
- RefSeq NM_005704.2 (NON-CURRENT)
- Match location:
- Position 5598 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000220108)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ACGTGCTCTCTGAATGCCAAA
- Hairpin Sequence:
-
5'-CCGG-ACGTGCTCTCTGAATGCCAAA-CTCGAG-TTTGGCATTCAGAGAGCACGT-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGACGTGCTCTCTGAATGCCAAACTCGAGTTTGGCATTCAGAGAGCACGTTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAACGTGCTCTCTGAATGCCAAACTCGAGTTTGGCATTCAGAGAGCACGT-3'
Other clones with same target sequence:
(none)
