Construct: shRNA TRCN0000221234
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_143053.4-369s1c2, TRCN0000024139, XM_143053.4-369s1c1
- DNA Barcode:
- CCCAACATTGTGCGTCTCTAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- LOC241864 (241864)
- Gene Description:
- similar to SNF related kinase
- Transcript:
- RefSeq XM_143053.4 (NON-CURRENT)
- Match location:
- Position 369 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000221234)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCCAACATTGTGCGTCTCTAT
- Hairpin Sequence:
-
5'-CCGG-CCCAACATTGTGCGTCTCTAT-CTCGAG-ATAGAGACGCACAATGTTGGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCCAACATTGTGCGTCTCTATCTCGAGATAGAGACGCACAATGTTGGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCCAACATTGTGCGTCTCTATCTCGAGATAGAGACGCACAATGTTGGG-3'
Other clones with same target sequence:
(none)
