Construct: shRNA TRCN0000262245

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001136476.1-245s21c1
DNA Barcode:
CAGGCTCATTCTGAAGTAAAG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Slx (664829)
Gene Description:
Sycp3 like X-linked
Transcript:
RefSeq NM_001136476.1 (CURRENT)
Match location:
Position 245 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000262245)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGGCTCATTCTGAAGTAAAG
Hairpin Sequence:
5'-CCGG-CAGGCTCATTCTGAAGTAAAG-CTCGAG-CTTTACTTCAGAATGAGCCTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGGCTCATTCTGAAGTAAAGCTCGAGCTTTACTTCAGAATGAGCCTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGGCTCATTCTGAAGTAAAGCTCGAGCTTTACTTCAGAATGAGCCTG-3'

Other clones with same target sequence:

(none)