Construct: shRNA TRCN0000271971

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001085549.1-4966s21c1
DNA Barcode:
CCAGACTTGTGGTAGTAATAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Trabd2b (666048)
Gene Description:
TraB domain containing 2B
Transcript:
RefSeq NM_001085549.1 (CURRENT)
Match location:
Position 4966 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000271971)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGACTTGTGGTAGTAATAA
Hairpin Sequence:
5'-CCGG-CCAGACTTGTGGTAGTAATAA-CTCGAG-TTATTACTACCACAAGTCTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGACTTGTGGTAGTAATAACTCGAGTTATTACTACCACAAGTCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGACTTGTGGTAGTAATAACTCGAGTTATTACTACCACAAGTCTGG-3'

Other clones with same target sequence:

(none)