Construct: shRNA TRCN0000279380

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_026225.3-1277s21c1
DNA Barcode:
TTGAGTCTCCATGCGAATAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cog6 (67542)
Gene Description:
component of oligomeric golgi complex 6
Transcript:
RefSeq NM_026225.3 (CURRENT)
Match location:
Position 1277 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000279380)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TTGAGTCTCCATGCGAATAAA
Hairpin Sequence:
5'-CCGG-TTGAGTCTCCATGCGAATAAA-CTCGAG-TTTATTCGCATGGAGACTCAA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTTGAGTCTCCATGCGAATAAACTCGAGTTTATTCGCATGGAGACTCAATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATTGAGTCTCCATGCGAATAAACTCGAGTTTATTCGCATGGAGACTCAA-3'

Other clones with same target sequence:

(none)