Construct: shRNA TRCN0000302699

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007510.2-717s21c1
DNA Barcode:
GCAAATGCCAATAGGAAGTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Atp6v1e1 (11973)
Gene Description:
ATPase, H+ transporting, lysosomal V1 subunit E1
Transcript:
RefSeq NM_007510.2 (CURRENT)
Match location:
Position 717 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000302699)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAAATGCCAATAGGAAGTTT
Hairpin Sequence:
5'-CCGG-GCAAATGCCAATAGGAAGTTT-CTCGAG-AAACTTCCTATTGGCATTTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAAATGCCAATAGGAAGTTTCTCGAGAAACTTCCTATTGGCATTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAAATGCCAATAGGAAGTTTCTCGAGAAACTTCCTATTGGCATTTGC-3'

Other clones with same target sequence:

  1. TRCN0000103776