Construct: shRNA TRCN0000321857

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019978.3-442s21c1
DNA Barcode:
GACCGCTACTTCAAAGGAATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Dclk1 (13175)
Gene Description:
doublecortin-like kinase 1
Transcript:
RefSeq NM_019978.3 (CURRENT)
Match location:
Position 442 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000321857)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GACCGCTACTTCAAAGGAATT
Hairpin Sequence:
5'-CCGG-GACCGCTACTTCAAAGGAATT-CTCGAG-AATTCCTTTGAAGTAGCGGTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGACCGCTACTTCAAAGGAATTCTCGAGAATTCCTTTGAAGTAGCGGTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGACCGCTACTTCAAAGGAATTCTCGAGAATTCCTTTGAAGTAGCGGTC-3'

Other clones with same target sequence:

  1. TRCN0000221257