Construct: shRNA TRCN0000332243

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_026539.2-2638s21c1
DNA Barcode:
CCCAACTTACATATACTACTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Chd1l (68058)
Gene Description:
chromodomain helicase DNA binding protein 1-like
Transcript:
RefSeq NM_026539.2 (CURRENT)
Match location:
Position 2638 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000332243)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCAACTTACATATACTACTT
Hairpin Sequence:
5'-CCGG-CCCAACTTACATATACTACTT-CTCGAG-AAGTAGTATATGTAAGTTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCAACTTACATATACTACTTCTCGAGAAGTAGTATATGTAAGTTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCAACTTACATATACTACTTCTCGAGAAGTAGTATATGTAAGTTGGG-3'

Other clones with same target sequence:

  1. TRCN0000109406