Construct: shRNA TRCN0000345088
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172400.3-860s21c1
- DNA Barcode:
- CCAGAGAGTAGCGATTGCTTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Dnajc8 (68598)
- Gene Description:
- DnaJ heat shock protein family (Hsp40) member C8
- Transcript:
- RefSeq NM_172400.3 (CURRENT)
- Match location:
- Position 860 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000345088)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGAGAGTAGCGATTGCTTT
- Hairpin Sequence:
-
5'-CCGG-CCAGAGAGTAGCGATTGCTTT-CTCGAG-AAAGCAATCGCTACTCTCTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGAGAGTAGCGATTGCTTTCTCGAGAAAGCAATCGCTACTCTCTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGAGAGTAGCGATTGCTTTCTCGAGAAAGCAATCGCTACTCTCTGG-3'
Other clones with same target sequence:
-
TRCN0000011805
