Construct: shRNA TRCN0000349761

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011127.2-1565s21c1
DNA Barcode:
GCTCCCAGACCAACCGATTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Prrx1 (18933)
Gene Description:
paired related homeobox 1
Transcript:
RefSeq NM_011127.2 (CURRENT)
Match location:
Position 1565 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000349761)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTCCCAGACCAACCGATTAT
Hairpin Sequence:
5'-CCGG-GCTCCCAGACCAACCGATTAT-CTCGAG-ATAATCGGTTGGTCTGGGAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTCCCAGACCAACCGATTATCTCGAGATAATCGGTTGGTCTGGGAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTCCCAGACCAACCGATTATCTCGAGATAATCGGTTGGTCTGGGAGC-3'

Other clones with same target sequence:

(none)