Construct: shRNA TRCN0000381108

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019788.3-428s21c1
DNA Barcode:
TTGTTCACAGAGGCGAAGCAC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Bloc1s6 (18457)
Gene Description:
biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
Transcript:
RefSeq NM_019788.3 (CURRENT)
Match location:
Position 428 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000381108)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TTGTTCACAGAGGCGAAGCAC
Hairpin Sequence:
5'-CCGG-TTGTTCACAGAGGCGAAGCAC-CTCGAG-GTGCTTCGCCTCTGTGAACAA-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTTGTTCACAGAGGCGAAGCACCTCGAGGTGCTTCGCCTCTGTGAACAATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATTGTTCACAGAGGCGAAGCACCTCGAGGTGCTTCGCCTCTGTGAACAA-3'

Other clones with same target sequence:

(none)