Construct: shRNA TRCN0000416617
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_008310.3-1634s21c1
- DNA Barcode:
- ATGCAGCTCAGCTCGTAATAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Htr1f (15557)
- Gene Description:
- 5-hydroxytryptamine (serotonin) receptor 1F
- Transcript:
- RefSeq NM_008310.3 (CURRENT)
- Match location:
- Position 1634 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000416617)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ATGCAGCTCAGCTCGTAATAT
- Hairpin Sequence:
-
5'-CCGG-ATGCAGCTCAGCTCGTAATAT-CTCGAG-ATATTACGAGCTGAGCTGCAT-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGATGCAGCTCAGCTCGTAATATCTCGAGATATTACGAGCTGAGCTGCATTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAATGCAGCTCAGCTCGTAATATCTCGAGATATTACGAGCTGAGCTGCAT-3'
Other clones with same target sequence:
(none)
