Construct: shRNA TRCN0000421890
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_138652.2-3777s21c1
- DNA Barcode:
- GTGACTTAAGTGCTAATATTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Atp12a (192113)
- Gene Description:
- ATPase, H+/K+ transporting, nongastric, alpha polypeptide
- Transcript:
- RefSeq NM_138652.2 (CURRENT)
- Match location:
- Position 3777 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000421890)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GTGACTTAAGTGCTAATATTT
- Hairpin Sequence:
-
5'-CCGG-GTGACTTAAGTGCTAATATTT-CTCGAG-AAATATTAGCACTTAAGTCAC-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGTGACTTAAGTGCTAATATTTCTCGAGAAATATTAGCACTTAAGTCACTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGTGACTTAAGTGCTAATATTTCTCGAGAAATATTAGCACTTAAGTCAC-3'
Other clones with same target sequence:
(none)
