Construct: shRNA TRCN0000429437
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_011784.3-1287s21c1
- DNA Barcode:
- TGAGAAGTCAGCCAGTTATTC
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Aplnr (23796)
- Gene Description:
- apelin receptor
- Transcript:
- RefSeq NM_011784.3 (CURRENT)
- Match location:
- Position 1287 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000429437)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TGAGAAGTCAGCCAGTTATTC
- Hairpin Sequence:
-
5'-CCGG-TGAGAAGTCAGCCAGTTATTC-CTCGAG-GAATAACTGGCTGACTTCTCA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTGAGAAGTCAGCCAGTTATTCCTCGAGGAATAACTGGCTGACTTCTCATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATGAGAAGTCAGCCAGTTATTCCTCGAGGAATAACTGGCTGACTTCTCA-3'
Other clones with same target sequence:
(none)
