Construct: ORF TRCN0000465432
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF013773.1_s317c1
- Derived from:
- ccsbBroadEn_10667
- DNA Barcode:
- CCTCGTCACCTTATTCTCTAAGCA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- A1BG (1)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000465432
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 1 | A1BG | alpha-1-B glycoprotein | NM_130786.4 | 75.3% | 75.3% | 1_366del |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1185
- ORF length:
- 1119
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcatggc gccagtgtcc tggatcaccc ccggcctgaa aacaacagca gtgtgccgag 121 gtgtgctgcg gggtgtgact tttctgctga ggcgggaggg cgaccatgag tttctggagg 181 tgcctgaggc ccaggaggat gtggaggcca cctttccagt ccatcagcct ggcaactaca 241 gctgcagcta ccggaccgat ggggaaggcg ccctctctga gcccagcgct actgtgacca 301 ttgaggagct cgctgcacca ccaccgcctg tgctgatgca ccatggagag tcctcccagg 361 tcctgcaccc tggcaacaag gtgaccctca cctgcgtggc tcccctgagt ggagtggact 421 tccagctacg gcgcggggag aaagagctgc tggtacccag gagcagcacc agcccagatc 481 gcatcttctt tcacctgaac gcggtggccc tgggggatgg aggtcactac acctgccgct 541 accggctgca tgacaaccaa aacggctggt ccggggacag cgcgccggtc gagctgattc 601 tgagcgatga gacgctgccc gcgccggagt tctccccgga gccggagtcc ggcagggcct 661 tgcggctgcg gtgcctggcg cccctggagg gcgcgcgctt cgccctggtg cgcgaggaca 721 ggggcgggcg ccgcgtgcac cgtttccaga gccccgctgg gaccgaggcg ctcttcgagc 781 tgcacaacat ttccgtggct gactccgcca actacagctg cgtctacgtg gacctgaagc 841 cgcctttcgg gggctccgcg cccagcgagc gcttGGAGCT GCACGTGGAC GGACCCCCTC 901 CCAGGCCTCA GCTCCGGGCG ACGTGGAGTG GGGCGGTCCT GGCGGGCCGA GATGCCGTCC 961 TGCGCTGCGA GGGACCCATC CCCGACGTCA CCTTCGAGCT GCTGCGCGAG GGCGAGACGA 1021 AGGCCGTGAA GACGGTCCGC ACCCCCGGGG CCGCGGCGAA CCTCGAGCTG ATCTTCGTGG 1081 GGCCCCAGCA CGCCGGCAAC TACAGGTGCC GCTACCGCTC CTGGGTGCCC CACACCTTCG 1141 AATCGGAGCT CAGCGACCCT GTGGAGCTCC TGGTGGCAGA AAGCTGCCCA ACTTTCTTGT 1201 ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT 1261 AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG 1321 GAAAGGACGA CCTCGTCACC TTATTCTCTA AGCAACGCGT TAAGTCgaca atcaacctct 1381 ggattacaaa atttgtgaaa gatt