Construct: ORF TRCN0000466555

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008402.1_s317c1
Derived from:
ccsbBroadEn_13618
DNA Barcode:
GCCTTGCACGCTAATAGATGGTAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKDD1A (348094)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466555
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 348094 ANKDD1A ankyrin repeat and death do... NM_182703.6 76.3% 76.4% 1_273del;1063_1158del;1548T>C
2 human 7576 ZNF28 zinc finger protein 28 NM_001369767.1 6.5% 4.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1266
ORF length:
1197
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaatgcgctt ctcctgtctg cctggttcgg ccacttacga atcctccaga
121tcttggtaaa ctcaggggcc aagatccact gtgagagcaa ggatggcctg accttactgc
181actgcgcagc ccaaaaaggc catgtgcctg tgctggcgtt cataatggag gacctggagg
241atgtggccct ggaccacgta gacaagctgg ggaggacggc gtttcacagg gcagctgagc
301acgggcagct ggatgctctg gacttcctcg tgggctctgg ctgtgaccac aatgtcaaag
361acaaggaggg gaacactgcc cttcatctgg ctgctggtcg gggccatatg gctgtgctgc
421agcgacttgt ggacatcggg ctggacctgg aggagcagaa tgcggaaggt ctgactgccc
481tgcattcggc tgctggagga tcccaccctg actgtgtgca gctcctcctc agggctggga
541gcaccgtgaa tgccctcacc cagaaaaacc taagctgcct tcactatgca gccctcagtg
601gctcggagga tgtgtctcgg gtcctcatcc acgcaggagg ctgcgccaac gtggttgatc
661atcagggtgc ctctcctctg cacctcgctg tgaggcacaa cttccctgcc ttggtccggc
721tcctcatcaa ctccgacagt gacgtgaatg ccgtggacaa taggcagcag acgccccttc
781acctggctgc agagcacgcc tggcaggaca tagcagatat gctcctcatt gctggggttg
841acttaaacct gagagataag gaccacccca gtgatccctc tgggaagagc ttgtccttta
901agcaggacca tcggcaggaa acacagcagc tccgttctgt gctgtggcgg ctggcctCCA
961GGTATCTGCA GCCCCGTGAG TGGAAGAAGC TGGCATATTC CTGGGAGTTC ACGGAGGCAC
1021ATGTCGACGC CATCGAGCAA CAGTGGACAG GCACCAGGAG CTATCAGGAG CACGGCCACC
1081GAATGCTGCT CATTTGGCTG CATGGCGTGG CCACGGCTGG TGAGAACCCC AGCAAAGCGC
1141TGTTCGAGGG CCTCGTGGCC ATTGGCAGGA GGGACCTGGC TGGCTGGAGT ACAATGGCGA
1201GATCTCAGCT CACGGCAACC TCCGCCTCCC GGGTTCAAAT GATTCTCGTG CCTCAGCCTC
1261CCGAGTTGCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
1321TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
1381CTTGGCTTTA TATATCTTGT GGAAAGGACG AGCCTTGCAC GCTAATAGAT GGTATACGCG
1441TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)