Construct: ORF TRCN0000467538
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF015518.1_s317c1
- Derived from:
- ccsbBroadEn_15701
- DNA Barcode:
- TACCTCTAAGTCAATTTATGAAAA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ZNF267 (10308)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000467538
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 10308 | ZNF267 | zinc finger protein 267 | NM_003414.6 | 99.9% | 99.7% | 91G>A;1049G>A |
| 2 | human | 10308 | ZNF267 | zinc finger protein 267 | NM_001265588.2 | 95.6% | 95.5% | 0_1ins96;953G>A |
| 3 | human | 10308 | ZNF267 | zinc finger protein 267 | NR_049749.2 | 67.2% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 2295
- ORF length:
- 2229
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcatggg actgttgaca ttcagggatg tggccgtaga attctctttg gaggagtggg 121 aacacctgga accagctcag aagaatttgt atcagaatgt gatgttagaa aactacagaa 181 acctggtctc tctgggtctt gttgtctcta agccggacct gatcaccttt ttggaacaaa 241 ggaaagagcc ttggaatgtg aagagtgagg agacagtagc catccagcca gatgtgtttt 301 cgcattataa caaggacctg ttgacagagc actgcacaga agcttcattc caaaaagtga 361 tatcgaggag acatgggagc tgtgatcttg agaatttaca tttaagaaaa aggtggaaaa 421 gggaggagtg tgaagggcac aatggatgtt atgatgaaaa gacttttaaa tatgatcaat 481 ttgatgaatc ctctgttgaa agtttgtttc accagcaaat actttcttct tgtgccaaaa 541 gctataactt tgatcaatat aggaaggtct ttactcattc atcattgctt aatcaacaag 601 aggaaataga tatttgggga aaacatcaca tatatgataa aacttcagtg ttatttaggc 661 aggtctctac tctaaatagt taccgaaatg tttttattgg agagaaaaat tatcattgca 721 ataattctga aaaaaccttg aaccaaagct caagccctaa aaatcatcag gaaaattatt 781 ttctagaaaa acaatacaaa tgtaaagaat ttgaggaagt ctttcttcag agtatgcatg 841 ggcaagagaa acaagaacag tcttacaaat gtaataaatg tgtagaagtt tgtacccagt 901 cattaaaaca tattcaacat cagaccatcc atatcagaga aaactcatat agctataaca 961 aatatgataa agatcttagt cagtcatcaa atcttagaaa gcagataatc cataatgaag 1021 agaaaccata caaatgtgaa aaatgtgggg atagcttaaa ccatagtttg caccttactc 1081 aacatcagat cattcctacc gaagagaaac cctataaatg gaaagaatgt ggcaaggtct 1141 ttaaccttaa ctgtagttta taccttacta aacagcagca aattgatact ggagaaaacc 1201 tttacaaatg taaagcatgt agcaaatctt ttactcgttc ctccaatctt attgtgcatc 1261 agagaattca cactggagag aaaccataca aatgtaaaga atgtggcaaa gcctttcgct 1321 gtagttcata ccttactaaa cataagcgaa ttcatactgg agagaaacct tataaatgta 1381 aagaatgtgg aaaagctttt aaccgtagtt catgccttac tcaacatcag acaactcata 1441 caggagaaaa actttacaaa tgtaaagtat gtagcaaatc ttatgctcgt tcttcaaatc 1501 ttattatgca tcagagagtt catactggag agaagcctta taaatgtaaa gaatgtggca 1561 aagtctttag ccgtagttct tgccttactc aacatcggaa aattcatact ggagaaaatc 1621 tttacaaatg caaagtatgt gctaaacctt ttacttgttt ctcaaatctt attgtgcatg 1681 agagaattca tactggagag aaaccctata aatgtaaaga atgtggcaaa gcctttcctt 1741 atagttcaca ccttattcga catcatcgaa ttcatactgg agaaaaacca tacaaatgta 1801 aagcatgtag caaatctttt agtgactcct caggtcttac tgtgcatcgg cgaactcata 1861 ctGGAGAGAA ACCCTATACA TGTAAAGAAT GTGGCAAAGC CTTTAGTTAT AGTTCAGATG 1921 TTATTCAGCA TCGGAGAATT CATACTGGCC AGAGACCCTA CAAATGTGAA GAATGTGGCA 1981 AAGCCTTCAA CTATAGGTCA TACCTCACTA CACATCAGAG AAGTCATACT GGAGAGAGAC 2041 CCTACAAATG TGAAGAATGT GGCAAAGCCT TCAACTCTAG GTCATACCTC ACTACACATC 2101 GGAGAAGACA TACTGGAGAG AGACCCTACA AATGTGATGA ATGTGGTAAA GCCTTCAGCT 2161 ATAGGTCATA CCTCACTACA CATCGGAGAA GTCATAGTGG AGAGAGACCC TACAAATGTG 2221 AAGAATGTGG CAAAGCCTTT AACTCTAGGT CATACCTCAT TGCACATCAG AGAAGTCATA 2281 CTAGAGAAAA ACTTTACCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC 2341 CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA 2401 TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA TACCTCTAAG TCAATTTATG 2461 AAAAACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt