Construct: ORF TRCN0000468044

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009005.1_s317c1
Derived from:
ccsbBroadEn_14990
DNA Barcode:
ACCGCCTTAGATGTTGGACATTCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IRAK3 (11213)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468044
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11213 IRAK3 interleukin 1 receptor asso... NM_007199.3 99.9% 99.8% 439A>G
2 human 11213 IRAK3 interleukin 1 receptor asso... NM_001142523.2 89.7% 89.5% 132_133ins183;256A>G
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1854
ORF length:
1788
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ggggaactgt ggggcccgcg gcgcgctgtc ggcgcacacg ctgctgttcg
121acctgccgcc cgcgctgctc ggagagctct gcgctgttct ggacagctgc gacggcgcgc
181tgggctggcg cggcctggca gagagacttt caagcagctg gctggatgtt cgtcatattg
241aaaagtatgt agaccaaggt aaaagtggaa caagagaatt actttggtcc tgggcacaga
301aaaacaagac catcggtgac cttttacagg tcctccagga gatgggacat cgtcgagcta
361ttcatttaat tacaaactat ggagcagtgt tgagtccttc agagaagagt tatcaggaag
421gtggatttcc aaatatatta ttcaaggaaa cagccaatgt caccgtggat aatgttctta
481ttcctgaaca taatgaaaaa ggagtactgc ttaaatcttc catcagcttt caaaatatca
541tagaaggaac tagaaatttc cacaaagact tcctaattgg agaaggagag atttttgagg
601tatacagagt ggagattcaa aacctaacat atgctgtcaa attatttaaa caggagaaaa
661aaatgcagtg taagaagcat tggaagaggt ttttatctga gcttgaagtt ttactactgt
721ttcatcaccc aaacatacta gagttggctg catattttac agagactgag aagttctgtc
781tgatttatcc atacatgaga aatggaacac tttttgacag attgcagtgt gtaggtgaca
841cggccccact cccttggcac attcgaatcg gtatattaat aggaatatcc aaagccattc
901actacctgca caacgttcaa ccatgctcgg tcatctgtgg cagtatatca agtgcaaaca
961tccttttgga tgatcagttt caacccaaac taactgattt tgccatggca cacttccggt
1021cccacctaga acatcagagt tgtaccataa atatgaccag cagcagcagt aaacatctgt
1081ggtacatgcc agaagagtac atcagacagg ggaaactttc cattaaaaca gatgtctaca
1141gctttggaat tgtaataatg gaagttctaa caggatgtag agtagtgtta gatgatccaa
1201aacatatcca gctgcgggat ctccttagag aattgatgga gaagagaggc ctggattcat
1261gtctctcatt tctagataag aaagtgcctc cctgccctcg gaatttctct gccaagctct
1321tctgtttggc aggccggtgt gctgcaacgc gggcaaagtt aagaccatca atggatgaag
1381ttttaaatac tcttgaaagt actcaagcca gcttgtattt tgctgaagat cctcccacat
1441cactaaagtc cttcaggtgt ccttctcctc tattcctgga gaatgtacca agtattccag
1501tggaagatga tgaaagccag aataacaatt tactaccttc tgatgaaggc ctgaggatag
1561acagaatgac tcagaaaact ccttttGAAT GCAGCCAGTC TGAGGTTATG TTTCTGAGCT
1621TGGACAAAAA GCCAGAGAGC AAGAGAAATG AGGAAGCTTG CAACATGCCC AGTTCTTCTT
1681GTGAAGAAAG TTGGTTCCCA AAGTATATAG TTCCATCCCA GGACTTAAGG CCCTATAAGG
1741TAAATATAGA TCCTTCTTCA GAAGCTCCAG GGCATTCTTG CAGGAGCAGG CCAGTGGAGA
1801GCAGCTGTTC CTCCAAATTT TCCTGGGATG AATATGAACA GTACAAAAAA GAATACCCAA
1861CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1921ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1981TATCTTGTGG AAAGGACGAA CCGCCTTAGA TGTTGGACAT TCGACGCGTT AAGTCgacaa
2041tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)