Construct: ORF TRCN0000469184

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015903.1_s317c1
Derived from:
ccsbBroadEn_07077
DNA Barcode:
GTGATGCCGTGCAAATGCGACCAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TSPAN8 (7103)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469184
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7103 TSPAN8 tetraspanin 8 NM_001369760.1 99.5% 98.7% 103G>A;218G>C;637T>G
2 human 7103 TSPAN8 tetraspanin 8 NM_004616.3 99.5% 98.7% 103G>A;218G>C;637T>G
3 human 7103 TSPAN8 tetraspanin 8 XM_006719583.3 99.5% 98.7% 103G>A;218G>C;637T>G
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
777
ORF length:
711
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc aggtgtgagt gcctgtataa aatattctat gtttaccttc aacttcttgt
121tctggctatg tggtatcttg atcctagcat tagcaatatg ggtacgaata agcaatgact
181ctcaagcaat ttttggttct gaagatgtag gctctagctc ctacgttgct gtggacatat
241tgattgctgt aggtgccatc atcatgattc tgggcttcct ggcatgctgc ggtgctataa
301aagaaagtcg ctgcatgctt ctgttgTTTT TCATAGGCTT GCTTCTGATC CTGCTCCTGC
361AGGTGGCGAC AGGTATCCTA GGAGCTGTTT TCAAATCTAA GTCTGATCGC ATTGTGAATG
421AAACTCTCTA TGAAAACACA AAGCTTTTGA GCGCCACAGG GGAAAGTGAA AAACAATTCC
481AGGAAGCCAT AATTGTGTTT CAAGAAGAGT TTAAATGCTG CGGTTTGGTC AATGGAGCTG
541CTGATTGGGG AAATAATTTT CAACACTATC CTGAATTATG TGCCTGTCTA GATAAGCAGA
601GACCATGCCA AAGCTATAAT GGAAAACAAG TTTACAAAGA GACCTGTATT TCTTTCATAA
661AAGACTTCTT GGCAAAAAAT TTGATTATAG TTATTGGAAT AGCATTTGGA CTGGCAGTTA
721TTGAGATACT GGGTTTGGTG TTTTCTATGG TCCTGTATTG CCAGATCGGG AACAAATGCC
781CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
841TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
901ATATATCTTG TGGAAAGGAC GAGTGATGCC GTGCAAATGC GACCATACGC GTTAAGTCga
961caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)