Construct: ORF TRCN0000469547

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016067.1_s317c1
Derived from:
ccsbBroadEn_05333
DNA Barcode:
TTCTTTCTAGCAGAGTCTAGCTCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DAOA (267012)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469547
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 267012 DAOA D-amino acid oxidase activator NM_172370.4 100% 100%
2 human 267012 DAOA D-amino acid oxidase activator XM_005254042.1 70.3% 59.6% (many diffs)
3 human 267012 DAOA D-amino acid oxidase activator NM_001161814.1 53.5% 53.5% 0_1ins213
4 human 267012 DAOA D-amino acid oxidase activator NM_001161812.1 46.8% 49.3% 0_1ins193;89_197del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
528
ORF length:
459
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttGGCACCAT GCTGGAAAAG CTGATGGGTG CTGATTCTCT CCAGCTTTTC AGATCCAGAT
121ATACATTGGG TAAAATCTAC TTCATAGGTT TTCAAAGGAG CATTCTTCTG AGCAAATCTG
181AAAACTCTCT AAACTCTATT GCAAAGGAGA CAGAAGAAGG AAGAGAGACG GTAACAAGGA
241AAGAAGGATG GAAGAGAAGG CATGAGGACG GCTATTTGGA AATGGCACAG AGGCATTTAC
301AGAGATCATT ATGTCCTTGG GTCTCTTACC TTCCTCAGCC CTATGCAGAG CTTGAAGAAG
361TAAGCAGCCA TGTTGGAAAA GTCTTCATGG CAAGAAACTA TGAGTTCCTT GCCTATGAGG
421CCTCTAAGGA CCGCAGGCAG CCTCTAGAAC GAATGTGGAC CTGCAACTAC AACCAGCAAA
481AAGACCAGTC ATGCAACCAC AAGGAAATAA CTTCTACCAA AGCTGAATTG CCAACTTTCT
541TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
601CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
661GTGGAAAGGA CGATTCTTTC TAGCAGAGTC TAGCTCAACG CGTTAAGTCg acaatcaacc
721tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

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