Construct: ORF TRCN0000469912

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010833.1_s317c1
Derived from:
ccsbBroadEn_10146
DNA Barcode:
GACCCCGGGATCCTGGCCCTTGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAJB3 (414061)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469912
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 414061 DNAJB3 DnaJ heat shock protein fam... NM_001001394.4 99.7% 100% 216G>C
2 human 100286922 LOC100286922 DnaJ heat shock protein fam... NR_037694.1 38.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
501
ORF length:
435
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt ggactactac gaggtgctgg acgtgccccg gcaggccTCA TCCGAGGCCA
121TCAAGAAGGC GTACCGCAAG CTGGCGCTCA AGTGGCACCC CGACAAAAAC CCTGAGAACA
181AGGAGGAAGC GGAGAGGAGA TTCAAGCAGG TGGCCGAGGC CTACGAGGTG TTGTCGGACG
241CCAAGAAACG CGATATCTAT GACCGCTATG GCGAGGCGGG CGCGGAGGGC GGCTGCACAG
301GCGGCAGGCC CTTCGAGGAC CCCTTCGAGT ACGTCTTCAG CTTCCGCGAC CCAGCCGACG
361TCTTCAGGGA GTTCTTCGGC GGCCAGGACC CATTCTCCTT TGACCTCTTG GGAAACCCGC
421TGGAGAATAT TTTGGGGGGG TCAGAGGAAC TGCTGGGGAA GCAGAAGCAG AGCGTCTGCA
481CCCCTTTTCT CTGCCTTCAG TGCCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
541CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
601AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAGACC CCGGGATCCT
661GGCCCTTGTC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)