Construct: ORF TRCN0000471045

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011469.1_s317c1
Derived from:
ccsbBroadEn_15603
DNA Barcode:
CGAATGCCAGTGTTTTCAATCGTG
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TAF9 (6880)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471045
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 102157402 AK6 adenylate kinase 6 NM_016283.5 99.8% 98.2% 507delT
2 human 102157402 AK6 adenylate kinase 6 NM_001015891.2 96.8% 90.9% (many diffs)
3 mouse 102216272 Ak6 adenylate kinase 6 NM_027592.3 86.4% 86.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
582
ORF length:
516
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt gcttccgaac atcctgctca ccggtacacc aggggttgga aaaaccacac
121taggcaaaga acttgcgtca aaatcaggac tgaaatacat taatgtgggt gatttagctc
181gagaagagca attgtatgat ggctatgatg aagagtatga ctgtcccatt ttagatGAAG
241ACAGAGTAGT TGATGAGTTA GATAACCAAA TGAGAGAAGG TGGAGTTATT GTTGATTACC
301ATGGTTGTGA TTTCTTCCCT GAACGCTGGT TTCATATAGT TTTTGTGCTG AGAACAGATA
361CCAATGTATT GTACGAAAGA CTTGAAACAA GGGGTTATAA TGAGAAGAAA CTAACAGACA
421ATATTCAGTG TGAGATTTTT CAAGTTCTTT ATGAAGAAGC CACAGCATCC TACAAGGAAG
481AAATCGTGCA TCAGCTGCCC AGTAATAAAC CAGAAGAGCT AGAAAATAAT GTAGATCAGA
541TCTTGAAATG GATTGAGCAG TGGATCAAAG ACATAACTCT TGCCCAACTT TCTTGTACAA
601AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA
661ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA
721GGACGACGAA TGCCAGTGTT TTCAATCGTG ACGCGTTAAG TCgacaatca acctctggat
781tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)

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