Construct: ORF TRCN0000471427

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004974.1_s317c1
Derived from:
ccsbBroadEn_00679
DNA Barcode:
CGCACGCATATTTTATCCTCTTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR39 (2863)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471427
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2863 GPR39 G protein-coupled receptor 39 NM_001508.3 100% 100%
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1428
ORF length:
1359
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcttcaccc agcctcccgg gcagtgactg ctcccaaatc attgatcaca
121gtcatgtccc cgagtttgag gtggccacct ggatcaaaat cacccttatt ctggtgtacc
181tgatcatctt cgtgatgggc cttctgggga acagcgccac cattcgggtc acccaggtgc
241tgcagaagaa aggatacttg cagaaggagg tgacagacca catggtgagt ttggcttgct
301cggacatctt ggtgttcctc atcggcatgc ccatggagtt ctacagcatc atctggaatc
361ccctgaccac gtccagctac accctgtcct gcaagctgca cactttcctc ttcgaggcct
421gcagctacgc tacgctgctg cacgtgctga cactcagctt tgagcgctac atcgccatct
481gtcacccctt caggtacaag gctgtgtcgg gaccttgcca ggtgaagctg ctgattggct
541tcgtctgggt cacctccgcc ctggtggcac tgcccttgct gtttgccatg ggtactgagt
601accccctggt gaacgtgccc agccaccggg gtctcacttg caaccgctcc agcacccgcc
661accacgagca gcccgagacc tccaatatgt ccatctgtac caacctctcc agccgctgga
721ccgtgttcca gtccagcatc ttcggcgcct tcgtggtcta cctcgtggtc ctgctctccg
781tagccttcat gtgctggaac atgatgcagg tgctcatgaa aagccagaag ggctcgctgg
841ccgggggcac gcggcctccg cagctgagga agtccgagag cgaagagagc aggaccgcca
901ggaggcagac catcatcttc ctgaggctga ttgttgtgac attggccgta tgctggatgc
961ccaaccagat tcggaggatc atggctgcgg ccaaacccaa gcacgactgg acgaggtcct
1021acttccgggc gtacatgatc ctccTCCCCT TCTCGGAGAC GTTTTTCTAC CTCAGCTCGG
1081TCATCAACCC GCTCCTGTAC ACGGTGTCCT CGCAGCAGTT TCGGCGGGTG TTCGTGCAGG
1141TGCTGTGCTG CCGCCTGTCG CTGCAGCACG CCAACCACGA GAAGCGCCTG CGCGTACATG
1201CGCACTCCAC CACCGACAGC GCCCGCTTTG TGCAGCGCCC GTTGCTCTTC GCGTCCCGGC
1261GCCAGTCCTC TGCAAGGAGA ACTGAGAAGA TTTTCTTAAG CACTTTTCAG AGCGAGGCCG
1321AGCCCCAGTC TAAGTCCCAG TCATTGAGTC TCGAGTCACT AGAGCCCAAC TCAGGCGCGA
1381AACCAGCCAA TTCTGCTGCA GAGAATGGTT TTCAGGAGCA TGAAGTTTTG CCAACTTTCT
1441TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
1501CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1561GTGGAAAGGA CGACGCACGC ATATTTTATC CTCTTTAACG CGTTAAGTCg acaatcaacc
1621tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

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