Construct: ORF TRCN0000471551

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013095.1_s317c1
Derived from:
ccsbBroadEn_05077
DNA Barcode:
GGAAAGGAGCGCGCCAACATACCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLAC8L1 (153770)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471551
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 153770 PLAC8L1 PLAC8 like 1 NM_001029869.3 100% 100%
2 human 153770 PLAC8L1 PLAC8 like 1 XM_005268381.3 83.7% 77.2% (many diffs)
3 human 153770 PLAC8L1 PLAC8 like 1 XM_011537571.2 83.4% 79% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
600
ORF length:
531
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaattggttt ggaagtaact tcttcaggtg tcctgaggat ctttccttac
121tcaacatata ctcaccTCTG TTGTCACACA TGTCATCTGA AGATGAACAT TTTATTTCCA
181ACTTGAGAGG CCATGTACCA GCCAGCGCTG TGGTGAAGCA GCCTGTTCGG GGAGCCAGTG
241GCAGGACGAC AATCACAGCA ATTGTCCAGA CTGGCGGGGG CTGGAGCACC GGTCTCTTCA
301GTGTCTGCAG AGATAGGAGA ATTTGTTTCT GTGGTCTATT CTGTCCTATG TGTCTTGAGT
361GTGACATCGC CAGGCATTAT GGAGAGTGTC TTTGTTGGCC GTTGTTACCT GGGTCCACCT
421TTGCACTGAG AATTGGCACC AGGGAGAGAC ATAAAATACA GGGCACACTG TGTGAAGACT
481GGCTGGCGGT GCACTGCTGT TGGGCTTTTT CCATCTGCCA GGTGGCCCGG GAACTCAAGA
541TGAGGACCTC CCAAGTCTAT GAAATCTGTG CAGTCCCAAT GACTAAGGAC ACCCTGGTTT
601TGCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
661GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
721TTTATATATC TTGTGGAAAG GACGAGGAAA GGAGCGCGCC AACATACCAA CGCGTTAAGT
781Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)