Construct: ORF TRCN0000471720

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012966.1_s317c1
Derived from:
ccsbBroadEn_09992
DNA Barcode:
GTAACCCACCATATGGGCGAGACG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VN1R2 (317701)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471720
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 317701 VN1R2 vomeronasal 1 receptor 2 NM_173856.2 99.9% 99.7% 112T>C
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1254
ORF length:
1185
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gactcacact ctttacccta ccccttttgc tttgtatcca ataaatatca
121gcgcagcctg gcatttgggg ccactaccag tctcctgctt tgtatccaat aaatatcagc
181gcagcctggc attcggggcc actaccggtc tccgcgtctt ggtggtagtg gtcccccaga
241cacagctgtc ttttctttca tctctttgtc ttgtgtcttt atttctacac tctcttgtct
301ctgcacacgg agagaaaccc accaaacctg tggggctgga ccctacacta ttccaggtag
361ttgttggaat cctggggaat ttttcactct tatattatta tatgttcctt tactttaggg
421gatacaagcc aagatccaca gatttgattc tcaggcacct gactgtagct gactccttgg
481ttatcctatc taaaagaatc ccagagacca tggcaacttt tgggttgaaa cattttgaca
541attattttgg atgcaaattt cttttgtatg cacacagggt aggcaggggt gtgtccattg
601gaagcacctg cctcttgagt gtcttccagg tgatcaccat caaccctagg aactccaggt
661gggcagagat gaaagtaaaa gccccgacat acattggtct ctccaatatc ctgtgctggg
721ccttccacat gctggtaaat gccatttttc ctatttatac aactggcaaa tggagcaaca
781acaacatcac aaagaaagga gatttgggat attgttctgc cccacttagt gatgaagtca
841caaagtcagt atatgcagca ttgacatcct tccatgatgt tttgtgtctg gggctcatgc
901TCTGGGCCAG CAGCTCCATC GTTTTGGTCT TGTACAGGCA CAAACAGCAG GTACAACACA
961TCTGTAGGAA CAATCTCTAC CCCAACTCTT CTCCTGGGAA CAGAGCCATC CAAAGCATCC
1021TTGCATTGGT GAGCACCTTT GCATTATGTT ACGCCCTTTC CTTCATCACC TACGTTTATT
1081TAGCTCTCTT CGATAATTCC AGTTGGTGGC TAGTGAACAC TGCTGCACTA ATCATTGCCT
1141GTTTTCCAAC TATTAGCCCT TTTGTTCTCA TGTGCCGTGA CCCCAGCAGA TCCAGGCTCT
1201GCAGTATCTG CTGCAGAAGA AATAGACGAT TCTTTCATGA TTTCAGGAAA ATGTTGCCAA
1261CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1321ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGCTTTATAT
1381ATCTTGTGGA AAGGACGAGT AACCCACCAT ATGGGCGAGA CGACGCGTTA AGTCgacaat
1441caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)