Construct: ORF TRCN0000472168

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005494.1_s317c1
Derived from:
ccsbBroadEn_12804
DNA Barcode:
CCAAGGATTTAGAGCCGCTATCAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DDI2 (84301)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472168
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84301 DDI2 DNA damage inducible 1 homo... NM_032341.5 52.8% 52.8% 634_1197del
2 mouse 68817 Ddi2 DNA-damage inducible protein 2 NM_001017966.2 47.7% 50.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
699
ORF length:
633
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct gctcaccgtg tactgtgtgc ggagggacct ctccgaggtg accttttccc
121tccaggtcga cgccgacttc gagctgcaca acttccgcgc gctgtgcgag ctcgagtctg
181gcatccccgc agccgagagc cagatcGTCT ATGCGGAAAG ACCTCTCACA GACAACCACA
241GATCATTGGC TTCTTATGGC TTGAAAGATG GGGACGTTGT GATTTTACGA CAGAAGGAGA
301ATGCAGACCC TCGACCTCCA GTGCAGTTCC CAAACTTACC CCGAATAGAT TTCAGTAGTA
361TAGCTGTGCC TGGCACATCA AGTCCCCGGC AGCGCCAGCC ACCAGGAACA CAGCAGTCCC
421ACTCATCTCC TGGAGAAATA ACTTCATCTC CTCAGGGCTT GGACAATCCA GCCTTGCTCC
481GAGATATGTT GCTGGCCAAC CCGCATGAGC TGTCCTTGCT GAAGGAACGC AATCCACCCC
541TGGCAGAAGC TCTGCTCAGT GGAGACCTTG AGAAATTTTC TAGAGTCCTG GTGGAGCAGC
601AGCAGGACCG AGCCCGGAGA GAGCAAGAAA GGATTCGTCT GTTTTCTGCT GATCCCTTTG
661ACCTTGAAGC TCAGGCAAAG ATAGAAGAAG ATATAAGGTA CCCAACTTTC TTGTACAAAG
721TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
781GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
841ACGACCAAGG ATTTAGAGCC GCTATCACAC GCGTTAAGTC gacaatcaac ctctggatta
901caaaatttgt gaaagatt

Download FASTA (ORF) (Full)