Construct: ORF TRCN0000475817

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006662.1_s317c1
Derived from:
ccsbBroadEn_09067
DNA Barcode:
CGTCAAAACCAGCTTTCTACAGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMX1 (81542)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475817
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 81542 TMX1 thioredoxin related transme... NM_030755.5 99.7% 100% 492T>G;648G>A
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
909
ORF length:
840
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgccctcc gggagtcttg cagttcccct ggcagtcctg gtgctgttgc
121tttggggtgc tccctggacg cacgggcggc ggagcaacgt tcgcgtcatc acggacgaga
181actggagaga actgctggaa ggagactgga tgatagaatt ttatgccccg tggtgccctg
241cttgtcaaaa tcttcaaccg gaatgggaaa gttttgctga atggggagaa gatcttgagg
301ttaatattgc gaaagtagat gtcacagagc agccaggact gagtggacgg tttatcataa
361ctgctcttcc tactatttat cattgtaaag atggtgaatt taggcgctat cagggtccaa
421ggactaagaa ggacttcata aactttataa gtgataaaga gtggaagagt attgagcccg
481tttcatcatg gtttggtcca ggttctgttc tgatgagtag tatgtcagca ctctttcagc
541tATCTATGTG GATCAGGACG TGCCATAACT ACTTTATTGA AGACCTTGGA TTGCCAGTGT
601GGGGATCATA TACTGTTTTT GCTTTAGCAA CTCTGTTTTC CGGACTGTTA TTAGGACTCT
661GTATGATATT TGTGGCAGAT TGCCTTTGTC CTTCAAAAAG GCGCAGACCA CAGCCATACC
721CATACCCTTC AAAAAAATTA TTATCAGAAT CTGCACAACC TTTGAAAAAA GTGGAGGAGG
781AACAAGAGGC GGATGAAGAA GATGTTTCAG AAGAAGAAGC TGAAAGTAAA GAAGGAACAA
841ACAAAGACTT TCCACAGAAT GCCATAAGAC AACGCTCTCT GGGTCCATCA TTGGCCACAG
901ATAAATCCTT GCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
961CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1021TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACGTCAA AACCAGCTTT CTACAGTCAC
1081GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)