Construct: ORF TRCN0000476410

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002602.1_s317c1
Derived from:
ccsbBroadEn_06541
DNA Barcode:
AGAGCGACGGTCGAAGTCTGGGGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LTBP2 (4053)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476410
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4053 LTBP2 latent transforming growth ... NM_000428.3 99.9% 99.9% (many diffs)
2 human 4053 LTBP2 latent transforming growth ... XM_011536765.2 92.9% 92.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
67
ORF end:
5530
ORF length:
5463
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggccatga ggccgcggac caaagcccgc agcccggggc gcgccctgcg gaacccctgg
121agaggcttcc tgccgctcac cctggctctc ttcgtgggcg cgggtcatgc ccaaagggac
181cccgtaggga gatacgagcc ggctggtgga gacgcgaatc gactgcggcg ccctgggggc
241agctacccgg cagcggctgc agccaaggtg tacagtctgt tccgggagca ggacgcgcct
301gtcgcgggct tgcagcccgt ggagcgggcc cagccgggct gggggagccc caggaggccc
361accgaggcgg aggccaggag gccgtcccgc gcgcagcagt cgcggcgtgt ccagccacct
421gcgcagaccc ggagaagcac tcccctgggc cagcagcaac cagcaccccg gacccgggcc
481gcgccggctc tcccacgcct ggggacccca cagcggtctg gggctgcgcc cccaaccccg
541ccgcgagggc gactcacggg gaggaacgtc tgcgggggac agtgctgccc aggatggaca
601acagcaaaca gcaccaacca ctgtatcaaa cccgtttgcg agccgccgtg ccagaaccgg
661ggctcctgca gccgcccgca gctctgtgtc tgccgctctg gtttccgtgg agcccgctgc
721gaggaggtca ttcccgatga ggaatttgac ccccagaact ccaggctggc acctcgacgc
781tgggccgagc gttcacccaa cctgcgcagg agcagtgcgg ctggagaggg caccttggcc
841agagcacagc cgccagcacc acagtcgccg cccgcaccac agtcgccacc agctgggacc
901ctgagtggcc tcagccagac ccacccttcc cagcagcacg tggggttgtc ccgcactgtc
961cgacttcacc cgactgccac ggccagtagc cagctctctt ccaacgccct gcccccggga
1021ccaggccttg agcagagaga tggcacccaa caggcggtac ctctggagca cccctcatcc
1081ccctgggggc tgaacctcac ggagaaaatc aagaagatca agatcgtctt cactcccacc
1141atctgcaagc agacctgtgc ccgtggacac tgtgccaaca gctgtgagag gggcgacacc
1201accaccctgt acagccaggg cggccatggg cacgatccca agtctggctt ccgcatctat
1261ttctgccaga tcccctgcct gaacggaggc cgctgcatcg gcagggacga atgctggtgc
1321cccgccaact ccaccgggaa gttctgccac ctgcctatcc cgcagccgga cagggagcct
1381ccagggaggg ggtcccgccc cagggccttg ctggaagccc cactgaagca gtccactttc
1441acactgccgc tctccaacca gctggcctcc gtgaacccct ccctggtgaa ggtgcacatt
1501caccacccac ccgaggcctc agtgcagatc caccaggtgg cccaggtgcg gggcggggtg
1561gaggaggccc tagtggagaa cagcgtggag accagacccc cgccctggct gcctgccagc
1621cctggccaca gcctctggga cagcaacaac atccctgctc ggtctggaga gccccctcgg
1681ccactgcccc cagcagcacc caggcctcga ggactgctgg gccggtgtta cctgaacact
1741gtgaacggac agtgtgccaa ccctctgctg gagctgacta cccaggagga ctgctgtggc
1801agtgtgggag ccttctgggg ggtgactttg tgtgccccat gcccacccag accagcctcc
1861ccggtgattg agaatggcca gctggagtgt cctcaggggt acaagagact gaacctcact
1921cactgccaag atatcaacga gtgcttgacc ctgggcctgt gcaaggacgc ggagtgtgtg
1981aataccaggg gcagctacct gtgcacatgc agacctggcc tcatgctgga tccatcgcgg
2041agccgctgtg tgtcggacaa ggcaatctcc atgctgcagg gactgtgcta ccggtcgctg
2101gggcccggca cctgcaccct gcctttggcc cagcggatca ccaagcagat atgctgctgc
2161agccgcgtgg gcaaagcatg gggcagcgag tgtgagaaat gccctctgcc tggcacagag
2221gccttcagag agatctgccc tgccggccac ggctacacct acgcgagctc cgacatccgc
2281ctgtccatga ggaaagccga ggaggaggaa ctggcaaggc ccccaaggga gcaagggcag
2341aggagcagcg gggcactgcc cgggccagca gagaggcagc ccctccgggt cgtcacggac
2401acctggcttg aggccgggac catccctgac aagggtgact ctcaggctgg ccaggtcacg
2461accagtgtca ctcatgcacc tgcctgggtc acagggaatg ccacaacccc accaatgcct
2521gaacagggga ttgcagagat acaggaagaa caagtgaccc cctccaccga tgtgctggtg
2581accctgagca ccccaggcat tgacagatgc gctgctggag ccaccaacgt ctgtggccct
2641ggaacctgcg tgaacctccc cgatggatac agatgtgtct gcagccctgg ctaccagctg
2701caccccagcc aggcctactg cacagatgac aacgagtgtc tgagggaccc ctgcaaggga
2761aaagggcgct gcatcaaccg cgtggggtcc tactcctgct tctgctaccc tggctacact
2821ctggccacct caggggcgac acaggagtgt caagatatca atgagtgtga gcagccaggg
2881gtgtgcagcg gggggcagtg caccaacacc gagggctcgt accactgcga gtgtgatcag
2941ggctacatca tggtcaggaa aggacactgc caagatatca acgaatgccg tcaccccggt
3001acctgccctg atgggagatg cgtcaattcc cctggctcct acacttgtct ggcctgtgag
3061gagggctacc ggggccagag tgggagctgt gtagatgtga atgagtgtct gactcccggg
3121gtctgtgccc atggaaagtg caccaaccta gaaggctcct tcagatgctc ttgtgagcag
3181ggctatgagg tcacctcaga tgagaagggc tgccaagatg tggatgagtg tgccagccgg
3241gcctcatgcc ccacaggcct ctgcctcaac acggagggct ccttcgcctg ctctgcctgt
3301gagaacgggt actgggtgaa tgaagacggc actgcctgtg aagacctaga tgagtgtgcc
3361ttcccgggag tctgcccctc cggagtctgc accaacacgg ctggctcctt ctcctgcaag
3421gactgcgatg ggggctaccg gcccagcccc ctgggtgact cctgtgaaga tgtggatgaa
3481tgtgaagacc cccagagcag ctgcctggga ggcgagtgca agaacactgt gggctcctac
3541cagtgcctct gtccccaggg cttccagctg gccaatggca ccgtgtgtga ggatgtgaat
3601gagtgcatgg gggaggagca ctgcgcacca cacggcgagt gcctcaacag ccacgggtct
3661ttcttctgtc tgtgcgcgcc tggcttcgtc agcgcagagg ggggcaccag ctgccaggat
3721gtggacgagt gtgccaccac agacccgtgt gtgggagggc actgtgtcaa caccgagggc
3781tccttcaact gtctatgtga gactggcttc cagccctccc cagagagtgg agagtgtgtg
3841gatattgacg agtgtgagga ctatggagac ccggtgtgtg gcacctggaa gtgtgaaaac
3901agccctggct cctaccgctg tgttctgggc tgccagcctg gcttccacat ggccccgaac
3961ggagactgca ttgacataga cgagtgcgcc aacgacacca tgtgtggcag ccacggcttc
4021tgtgacaaca ctgatggctc cttccgctgc ctctgtgacc agggcttcga gatctctccc
4081tcaggctggg actgtgtgga tgtgaacgag tgtgagctta tgctggcggt atgtggggcc
4141gcgctctgtg agaacgtgga gggctccttc ctgtgcctct gtgccagtga cctggaggag
4201tacgatgccc aggaggggca ctgccgccca cggggggctg gaggtcagag tatgtctgag
4261gccccaacgg gggaccatgc cccggccccc acccgcatgg actgctactc cgggcagaag
4321ggccatgcgc cctgctccag tgtcctgggc cggaacacca cacaggctga atgctgctgc
4381acccagggcg ctagctgggg agatgcctgt gacctctgcc cgtctgagga ctcagctgaa
4441ttcagcgaga tctgccctag tggaaaaggc tacattcctg tggaaggagc ctggacgttt
4501ggacagacca tgtacacaga tgcggatgag tgtgtgatat tcgggcctgg tctctgcccg
4561aacggccggt gcctcaacac cgtgcctggt tatgtctgcc tgtgcaatcc cggcttccac
4621tacgatgctt cccacaagaa gtgtgaggat cacgatgagt gccaggacct ggcctgtgag
4681aatggcgagt gcgtcaacac ggagggctcc ttccactgct tctgcagccc cccgctcacc
4741ctggacctca gccagcagcg ctgcatgaac agcaccagca gcacggagga cctccctgac
4801cacgacatcc acatggacat ctgctggaaa aaagtcacca atgatgtgtg cagcgaaccc
4861ctgcgtgggc accgcaccac ctacacggaa tgctgctgcc aggacggcga ggcctggagc
4921cagcagtgtg ctctgtgtcc cccgaggagc tctgaggtct atgctcagct gtgcaacgtg
4981gctcgcattg aggcagagcg ggaggccggg gtccacttcc ggccaggcta tgagtatggc
5041cccgggcccg atgacctgca ctacagcatc tatggcccag atggggcccc cttctacaac
5101tacctgggcc ccgaggacac cgtccctgat cctgccttcc ccaacacagc cggtcacTCA
5161GCGGACCGCA CACCCATCCT TGAGTCTCCT TTGCAGCCCT CAGAACTCCA GCCCCACTAC
5221GTGGCCAGCC ATCCAGAGCC CCCAGCCGGC TTCGAAGGGC TTCAGGCGGA GGAGTGCGGC
5281ATCCTGAACG GCTGTGAGAA TGGCCGCTGT GTGCGCGTGC GGGAGGGCTA CACCTGTGAC
5341TGTTTTGAGG GCTTCCAGCT GGATGCGGCC CACATGGCCT GCGTAGATGT GAATGAGTGT
5401GATGACTTGA ACGGGCCTGC TGTGCTCTGT GTCCATGGTT ACTGCGAGAA CACAGAGGGC
5461TCCTACCGCT GCCACTGCTC CCCGGGATAT GTGGCTGAGG CAGGGCCCCC CCACTGCACT
5521GCCAAGGAGT TGCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC
5581CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG
5641ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAAGAGC GACGGTCGAA GTCTGGGGCA
5701CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)

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