Construct: ORF TRCN0000477391

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005181.1_s317c1
Derived from:
ccsbBroadEn_10132
DNA Barcode:
CAAACCAAATCTGAGACGTGACGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR2A7 (401427)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477391
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 401427 OR2A7 olfactory receptor family 2... NM_001005328.1 99.7% 99.6% 171C>A;526T>N
2 human 107987545 LOC107987545 olfactory receptor 2A7 XM_024452660.1 99.7% 99.6% 171C>A;526T>N
3 human 79541 OR2A4 olfactory receptor family 2... NM_030908.2 99.3% 98.7% (many diffs)
4 human 392138 OR2A25 olfactory receptor family 2... NM_001004488.1 82.8% 79.3% (many diffs)
5 human 728377 ARHGEF34P Rho guanine nucleotide exch... NR_033942.1 14% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
999
ORF length:
930
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gggggacaat ataacatcca tcacagagtt cctcctactg ggatttcccg
121ttggcccaag gattcagatg ctcctctttg ggctcttctc cctgttctac gtcttcaccc
181tgctggggaa cgggaccata ctggggctca tctcactgga ctccagactg cacgccccaa
241tgtacttctt cctctcacac ctggcggtcg tcgacatcgc ctacgcctgc aacacggtgc
301cccggatgct ggtgaacctc ctgcatccag ccaagcccat ctcctttgcg ggccgcatga
361tgcagacctt tctgttttcc acttttgctg tcacagaatg tctcctcctg gtggtgatgt
421cctatgatct gtacgtggcc atctgccacc ccctccgata tttggccatc atgacctgga
481gagtctgcat caccctcgcg gtgacttcct ggaccactgg agtcctttta tccttgattc
541atcttgtgtt acttctacct ttacccttct gtaggcccca gaaaatttat cacntttttt
601gtgaaatctt ggctgttctc aaacttgcct gtgcagatac ccacatcaat gagaacatgg
661TCTTGGCCGG AGCAATTTCT GGGCTGGTGG GACCCTTGTC CACAATTGTA GTTTCATATA
721TGTGCATCCT CTGTGCTATC CTTCAGATCC AATCAAGGGA AGTTCAGAGG AAAGCCTTCT
781GCACCTGCTT CTCCCACCTC TGTGTGATTG GACTCTTTTA TGGCACAGCC ATTATCATGT
841ATGTTGGACC CAGATATGGG AACCCCAAGG AGCAGAAGAA ATATCTCCTG CTGTTTCACA
901GCCTCTTTAA TCCCATGCTC AATCCCCTTA TCTGTAGTCT TAGGAACTCA GAAGTGAAGA
961ATACTTTGAA GAGAGTGCTG GGAGTAGAAA GGGCTTTATT GCCAACTTTC TTGTACAAAG
1021TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
1081GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1141ACGACAAACC AAATCTGAGA CGTGACGTAC GCGTTAAGTC gacaatcaac ctctggatta
1201caaaatttgt gaaagatt

Download FASTA (ORF) (Full)