Construct: ORF TRCN0000477746

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013796.1_s317c1
Derived from:
ccsbBroadEn_13282
DNA Barcode:
TAAGAATTATATATTCTGTGGACA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PPP4R2 (151987)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477746
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 151987 PPP4R2 protein phosphatase 4 regul... NM_001318025.2 100% 100%
2 human 151987 PPP4R2 protein phosphatase 4 regul... NM_001318026.1 87.4% 87.6% (many diffs)
3 human 151987 PPP4R2 protein phosphatase 4 regul... NM_174907.4 86.3% 86% 117_287del
4 human 151987 PPP4R2 protein phosphatase 4 regul... NM_001318027.2 68.3% 63.4% 0_1ins280;41_42ins62
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1149
ORF length:
1080
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggacgtcgag aggctccagg aggcgctgaa agattttgag aagaggggga
121aaaaggaagt ttgtcctgtc ctggatcagt ttctttgtca tgtagccaag actggagaaa
181caattatccc ttttactatt cagcgactat gtgaattgtt aacagatcca aggagaaact
241atacaggaac agacaaattt ctcagaggag tagaaaagaa tgtgatggtt gttagctgtg
301tttatccttc ttcagagaaa aacaattcca atagtttaaa tcgaatgaat ggtgttatgt
361ttcctggaaa ttcaccaagc tatactgaga ggtctaatat aaatgggcct gggacaccca
421ggccacttaa tcgaccaaag gtttctttgt cagcccccat gacaacaaat gggttgcctg
481agagcacaga cagcaaagag gcaaatttgc agcaaaatga ggagaaaaat cacagtgact
541cttcgacctc tgaatcagaa gtttcctcag tgagcccttt gaaaaataaa catccagatg
601aagatgctgt ggaagctgag gggcatgagg taaaaagact caggtttgac aaagaaggtg
661aagtcagaga aacagccagt caaacgactt ccagcgaaat ttcttcagtt atggtaggag
721aaacagaagc atcatcttca TCTCAGGATA AAGACAAAGA TAGCCGTTGT ACCCGGCAGC
781ACTGTACAGA AGAGGATGAA GAAGAGGATG AAGAGGAAGA AGAAGAGTCT TTTATGACAT
841CAAGAGAAAT GATCCCAGAA AGAAAAAATC AAGAAAAAGA ATCTGATGAT GCCTTAACTG
901TGAATGAAGA GACTTCTGAG GAAAATAATC AAATGGAGGA ATCTGATGTG TCTCAAGCTG
961AGAAAGATTT GCTACATTCT GAAGGTAGTG AAAACGAAGG CCCTGTAAGT AGTAGTTCTT
1021CTGACTGCCG TGAAACAGAA GAATTAGTAG GATCCAATTC CAGTAAAACT GGAGAGATTC
1081TTTCAGAATC ATCCATGGAA AATGATGACG AAGCCACAGA AGTCACCGAT GAACCAATGG
1141AACAAGACTT GCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1201CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1261TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGATAAGAA TTATATATTC TGTGGACAAC
1321GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)