Construct: ORF TRCN0000478494

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008665.1_s317c1
Derived from:
ccsbBroadEn_15615
DNA Barcode:
CATATAGATTAGAATAGCCACTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TRIP6 (7205)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478494
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7205 TRIP6 thyroid hormone receptor in... NM_003302.3 99.9% 99.7% 886C>T
2 mouse 22051 Trip6 thyroid hormone receptor in... NM_011639.3 83% 86.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1494
ORF length:
1428
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc ggggcccacc tggctgcccc cgaagcagcc ggagcccgcc agagcccctc
121aggggagggc gatcccccgc ggcaccccgg ggccaccacc ggcccacgga gcagcactcc
181agccccaccc cagggtcaat ttttgccccc ttccatctga gcagtgttac caggccccag
241ggggaccgga ggatcggggg ccggcgtggg tggggtccca tggagtactc cagcacacgc
301aggggctccc tgcagacagg gggggccttc gccctggaag cctggacgcc gagatagact
361tgctgagcag cacgctggcc gagctgaatg ggggtcgggg tcatgcgtca cggcgaccag
421accgacaggc atatgagccc ccgccacctc ctgcctaccg cacgggctcc ctgaagccaa
481atccagcctc gccgctccca gcgtctccct atgggggccc cactccagcc tcttacacta
541ccgccagcac cccggctggc ccagccttcc ccgtgcaagt gaaggtggca cagccagtga
601ggggctgcgg cccacccagg cggggagcct ctcaggcctc tgggcccctc ccgggccccc
661actttcctct cccaggccga ggtgaagtct gggggcctgg ctataggagc cagagagagc
721cagggccagg ggccaaagag gaagctgctg gggtctctgg ccctgcagga agaggaagag
781gaggcgagca cgggccccag gtgcccctga gccagcctcc agaggatgag ctggataggc
841tgacgaagaa gctggttcac gacatgaacc acccgcccag cggggagtac tttggccagt
901gtggtggctg cggagaagat gtggttgggg atggggctgg ggttgtggcc tttgatcgcg
961tctttcacgt gggctgcttt gtatgttcta catgccgggc ccagcttcgc ggccagcatt
1021tctacgccgt ggagaggagg gcatattgcg agggctgcta cgtggccacc ctggagaaat
1081gtgccacgtg ctcccagccc atcctggacc ggatcctgcg ggctatgggg aaggcctacc
1141accctggctg cttcaccTGC GTGGTGTGTC ACCGCGGCCT CGACGGCATC CCCTTCACAG
1201TGGATGCTAC GAGCCAGATC CACTGCATTG AGGACTTTCA CAGGAAGTTT GCCCCAAGAT
1261GCTCAGTGTG CGGTGGGGCC ATAATGCCTG AGCCAGGTCA GGAGGAGACT GTGAGAATTG
1321TTGCTCTGGA TCGAAGTTTT CACATTGGCT GTTACAAGTG CGAGGAGTGT GGGCTGCTGC
1381TCTCCTCTGA GGGCGAGTGT CAGGGCTGCT ACCCGCTGGA TGGGCACATC TTGTGCAAGG
1441CCTGCAGCGC CTGGCGCATC CAGGAGCTCT CAGCCACCGT CACCACTGAC TGCTGCCCAA
1501CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1561ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1621TATCTTGTGG AAAGGACGAC ATATAGATTA GAATAGCCAC TTAACGCGTT AAGTCgacaa
1681tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)