Construct: ORF TRCN0000480125

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011660.2_s317c1
Derived from:
ccsbBroadEn_10565
DNA Barcode:
CACTGTACCGTGTTTCCGTCATCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LINC02085 (152225)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480125
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 152225 LINC02085 long intergenic non-protein... NR_026934.1 13.8% 1_279del;468A>G;565_2051del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
93
ORF end:
378
ORF length:
285
Sequence:
1TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT
61GATCAACAAG TTTGTACAAA AAAGTTGGCA CCATGAATAA TAGTTTCAAT AAGGAAGACA
121GAATGAGTTC TGACACGATG GTTGGGAGCT GTGACAGGCA GACGAAAAAT GGAGCCAAAT
181GGCATGGAGG TGTGTCATCA CTGCTGGATT TTACCTTGAT CTACATTCAG TTATCTACTT
241CTTTTCAAAA TGCTGGGCAT TCATTCAAGA AACAGCATAT GTGTTCTGAC TTTGAAGTAA
301TGGATGAACT GTCATGTGCA GTATATGGAA ATAAGTTTTA TTACCTTCTT CCCACATTAA
361CTCATCCATC CATTCAATTG CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
421TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
481GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGACACTGTA CCGTGTTTCC
541GTCATCAACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)