Construct: ORF TRCN0000480243

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007699.1_s317c1
Derived from:
ccsbBroadEn_08550
DNA Barcode:
TAGAAAGACCCTTCCTTCTACCCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF280C (55609)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480243
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55609 ZNF280C zinc finger protein 280C NM_017666.5 99.9% 100% 1851A>C
2 human 55609 ZNF280C zinc finger protein 280C XM_006724765.3 93.3% 93.3% 1245_1246ins147;1704A>C
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2277
ORF length:
2211
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga tgacgacaaa ccttttcaac caaaaaacat ttcaaaaatg gcagaactct
121ttatggaatg tgaagaagaa gagctagagc catggcagaa gaaagtagaa gaaactcagg
181atgaggatga cgatgaactg atctttgttg gagagatatc aagttcaaaa ccagccattt
241caaatatttt gaacagaggc cactccagct catcttcaaa aggaataaag agtgagccac
301acagtccagg tattcctgaa atattcagga ctgcaagtca acgctgcaga gacccaccat
361caaatccagt ggctgcctcg cctagatttc atcttgtatc taaatcttca caaagctctg
421ttactgttga gaatgcgtct aaacctgatt ttacaaagaa ttcacaagtt ggatcggata
481attcttcaat tttactgttt gactcgaccc aggaatcact accaccatcc caagacatac
541cagcaatttt tagagaaggt atgaaaaata cttcatatgt gttgaaacat ccttctactt
601ctaaagtaaa cagtgttact ccaaaaaaac caaagaccag tgaagatgtt cctcagataa
661atccctccac ttcattgcct ttaattggct ctcctccagt gacatcctcc caagttatgc
721tgtcaaaagg tacaaatacc tcatctccat atgatgctgg agcagattac ctaagagctt
781gtccaaagtg caatgttcag ttcaatcttt tggatccttt gaaataccac atgaagcatt
841gttgtccaga catgataact aaatttttgg gagtaattgt taaatcagaa cgtccatgtg
901atgaagacaa gactgattca gagacaggaa agttgatcat gttagtcaat gagttttatt
961atggaaggca tgaaggagtc actgagaaag agccaaagac ttacacaacc tttaaatgct
1021tcagttgctc gaaagttctt aaaaataata ttaggtttat gaaccacatg aaacatcact
1081tggaacttga gaagcagaac aatgaaagct gggaaaacca caccacctgc cagcactgtt
1141accggcaata tcccacaccc ttccaactgc agtgccacat tgagagtaca cacactcccc
1201atgagttttc tactatttgc aaaatctgtg aattatcatt tgaaacagag catattcttt
1261tacaacatat gaaggacacc cataaacctg gtgaaatgcc atatgtttgc caggtttgcc
1321agtttagatc atcaacattt tctgatgtag aagctcattt tagagcagcc catgaaaaca
1381ctaagaactt gctatgtcca ttttgcctca aagttagtaa aatggcaacc ccctacatga
1441atcattacat gaagcatcag aaaaaaggag ttcatcgttg cccaaaatgc agactacaat
1501ttttgaccag caaggagaaa gctgaacata aggcgcagca tcgtacattt ataaagccta
1561aagaactaga aggattgcct cctggagcaa aagttactat tcgagcttca cttggacctc
1621tccagtcaaa attaccaact gcacctttcg gttgcgctcc aggcacttct tttcttcagg
1681tcacacctcc gacatctcaa aatacaactg ctagaaatcc tagaaaatct aatgccagta
1741gatctaagac aagtaagctt catgcaacta catccactgc aagtaaagtt aatacaagta
1801agccaagggg acgtatagct aagtccaaag caaaaccctc ttacaagcaa aagcgacagc
1861gcaacagaaa aaataaaatg agccttgctt tgaagaacat aaggtgtcgt cggggcattc
1921acaagtgcat tgaatgtcat tccaaaataa aagattttgc aagccacttt tctatataca
1981TCCACTGCAG TTTTTGCAAG TACAATACTA ACTGTAACAA AGCCTTTGTA AATCATATGA
2041TGAGCTCTCA TAGCAACCAT CCAGGTAAAC GGTTTTGTAT TTTCAAGAAG CATTCAGGAA
2101CTCTCAGGGG CATTACTCTA GTGTGCCTTA AATGTGATTT CCTAGCTGAT TCTTCCGGCT
2161TAGATCGTAT GGCTAAACAC TTAAGTCAAC GTAAAACTCA TACTTGCCAA GTTATAATAG
2221AGAATGTTTC CAAAAGTACC TCAACTTCTG AACCCACTAC TGGCTGCTCA TTGAAATACC
2281CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
2341TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
2401ATATATCTTG TGGAAAGGAC GATAGAAAGA CCCTTCCTTC TACCCAACGC GTTAAGTCga
2461caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)