Construct: ORF TRCN0000481336

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007235.1_s317c1
Derived from:
ccsbBroadEn_05443
DNA Barcode:
GATTCCTCTGTAGCATGTTTTCGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR5AP2 (338675)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481336
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 338675 OR5AP2 olfactory receptor family 5... NM_001002925.1 100% 100%
2 mouse 258573 Olfr1020 olfactory receptor 1020 NM_146580.2 80.3% 85.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1017
ORF length:
948
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagacttatg aaagaggttc gaggcagaaa tcaaacagaa gtaacagaat
121ttctcctctt aggactttcc gacaatccag atctacaagg agtcctcttt gcattgtttc
181tgttgatcta tatggcaaac atggtgggca atttggggat gattgtattg attaagattg
241atctctgtct ccacaccccc atgtatttct ttctcagtag cctctctttt gtagatgcct
301cttactcttc ttccgtcact cccaagatgc tggtgaacct catggctgag aataaggcca
361tttcttttca tggatgtgct gcccagttct acttctttgg ctccttcctg gggactgagt
421gcttcctgtt ggccatgatg gcatatgacc gctatgcagc catttggaac cccctgctct
481acccagttct cgtgtctggg agaatttgct ttttgctaat agctacctcc ttcttagcag
541gttgtggaaa tgcagccata catacaggga tgacttttag gttgtccttt tgtggttcta
601ataggatcaa ccatttctac tgtgacaccc cgccactgct caaactctct tgctctgata
661cccacttcaa tggCATTGTG ATCATGGCAT TCTCAAGTTT TATTGTCATC AGCTGTGTTA
721TGATTGTCCT CATTTCCTAC CTGTGTATCT TCATTGCCGT CTTGAAGATG CCTTCGTTAG
781AGGGCAGGCA CAAAGCCTTC TCCACCTGTG CCTCTTACCT CATGGCTGTC ACCATATTCT
841TTGGAACAAT CCTCTTCATG TACTTGCGCC CTACATCTAG CTACTCAATG GAGCAAGACA
901AGGTTGTCTC TGTCTTTTAT ACAGTAATAA TCCCTGTGCT AAATCCCCTC ATCTATAGTT
961TAAAAAATAA GGATGTAAAA AAGGCCCTAA AGAAGATCTT ATGGAAACAC ATCTTGTTGC
1021CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1081TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1141ATATATCTTG TGGAAAGGAC GAGATTCCTC TGTAGCATGT TTTCGAACGC GTTAAGTCga
1201caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)